Module StdHandler

source code

Classes

[hide private]

ConvertHandler
Used to read records and produce output

ConvertDispatchHandler
Used to read records and produce output through a Dispatcher

RecognizeHandler

Handle_dbid

Handle_description

Handle_dbxref

Handle_sequence

Feature

Handle_feature_location

Handle_feature_qualifier

Handle_features

Handle_hsp_seqalign

Handle_hsp

Handle_search_table

Handle_search_header

Handle_search_info

Functions

[hide private]

add_int_handler(klass, tag, attrname)

source code

add_text_handler(klass, tag, attrname)

source code

add_text_dict_handler(klass, tag, attrname, key)

source code

add_text_decode_handler(klass, tag, attrname)

source code

add_first_text_handler(klass, tag, attrname)

source code

add_text_block_handler(klass, tag, joinattr, defaultjoin, attrname)

source code

add_value_handler(klass, tag, attrname)

source code

_fixup_sp_pattern(exp)

source code

_fast_dbxref_sp_general(s)

source code

_fast_dbxref_sp_prosite(s)

source code

_fast_dbxref_sp_embl(s)

source code

Variables

[hide private]

_fast_dbxref_sp_general_data = None

_fast_dbxref_sp_prosite_data = None

_fast_dbxref_sp_embl_data = None

_fast_dbxref_parser_table = {"sp-general": _fast_dbxref_sp_gen...

Variables Details

[hide private]

_fast_dbxref_parser_table

Value:

{"sp-general": _fast_dbxref_sp_general, "sp-prosite": _fast_dbxref_sp_
prosite, "sp-embl": _fast_dbxref_sp_embl,}