Class _Scanner

source code

Scans a rebase file.

Methods: feed Feed in one rebase record.

Instance Methods

[hide private]

feed(self, handle, consumer)
Feed in rebase data for scanning.

source code

_scan_line(self, uhandle)

source code

_text_in(self, uhandle, text, count)

source code

_scan_record(self, uhandle, consumer)

source code

_scan_sequence(self, text, consumer)

source code

_scan_methylation(self, text, consumer)

source code

_scan_enzyme_num(self, text, consumer)

source code

_scan_prototype(self, text, consumer)

source code

_scan_source(self, text, consumer)

source code

_scan_microorganism(self, text, consumer)

source code

_scan_temperature(self, text, consumer)

source code

_scan_date_entered(self, text, consumer)

source code

_scan_date_modified(self, text, consumer)

source code

_scan_Adeno2(self, text, consumer)

source code

_scan_Lambda(self, text, consumer)

source code

_scan_pBR322(self, text, consumer)

source code

_scan_PhiX174(self, text, consumer)

source code

_scan_SV40(self, text, consumer)

source code

Method Details

[hide private]

feed(self, handle, consumer)

source code

Feed in rebase data for scanning. handle is a file-like object containing rebase data. consumer is a Consumer object that will receive events as the rebase data is scanned.