Module Trees

source code

Classes

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TreeError

NodeData
Stores tree-relevant data associated with nodes (e.g.

Tree
Represents a tree using a chain of nodes with on predecessor (=ancestor) and multiple successors (=subclades).

Functions

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consensus(trees, threshold=0.5, outgroup=None)
Compute a majority rule consensus tree of all clades with relative frequency>=threshold from a list of trees.

source code

Variables

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PRECISION_BRANCHLENGTH = 6

PRECISION_SUPPORT = 6