Module web_parse

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Classes

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Token

Url

Record

LocusLinkParser

Functions

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is_empty_container(item)

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is_container(item)

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is_substring(a, b)

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print_params(params)

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process_list(params)

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put(dict, key, val)

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process_dict(params)

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is_open_token(target)

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is_close_token(target)

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is_token(target)

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Variables

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open_list = Token('open_list')

close_list = Token('close_list')

open_dict = Token('open_dict')

close_dict = Token('close_dict')

handle = open('Hs13225.htm')

undo_handle = Bio.File.UndoHandle(handle)

locuslink_parser = LocusLinkParser()

record = locuslink_parser.parse(handle)

__warningregistry__ = {('Bio.LocusLink was deprecated, as NCBI...

Variables Details

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warningregistry

Value:

{('Bio.LocusLink was deprecated, as NCBI\'s LocusLink was superceded b
y Entrez Gene. If you still need this module, please get in touch with
 the Biopython developers (biopython-dev@biopython.org) to avoid perma
nent removal of this module',
  <type 'exceptions.DeprecationWarning'>,
  11): 1}