Package IntelliGenetics

Parser for the MASE/Intelligenetics alignment file format.

http://pbil.univ-lyon1.fr/help/formats.html

Submodules

Bio.IntelliGenetics.Record: Martel based parser to read IntelliGenetics formatted files.
Bio.IntelliGenetics.intelligenetics_format: Martel regular expression for Intelligenetic format.

Classes

Iterator
Iterator interface to move over a file of IntelliGenetics entries one at a time.

_Scanner
Start up Martel to do the scanning of the file.

_RecordConsumer
Create an IntelliGenetics Record object from scanner generated information.

RecordParser
Parse IntelliGenetics files into Record objects