Version 4.1.5

const.h File Reference

Configuration file. More...

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Namespaces
namespace	seqplusplus_space
Variables
const int	BUFFERSEQ = 100
	for SequenceSet, number of sequence per buffer
const int	LGBLOC = 1000
	for Sequence,length of a bloc used to memory the sequence
const char	SKIPCHAR = '>'
	for Sequence, character definig the line to skip on top of a sequence (cf. fasta file)
const char	INVCHAR = '?'
	for Translator, for invalid declaration file
const char	COMCHAR = '#'
	comments characters
const char	LABPATT [3] = "->"
	label prefix before a declaration
const char	LABINV [4] = "INV"
	invalid label
const int	LGSTRING = 256
	string name max length
const int	LG_FILENAME = 200
	file name max length
const int	STREAM_PRECISION = 8
	precision for the o/ofstream
const double	PRECISION = 1e-7
	precision for comparing a double to 0, must be = 1e-(STREAM_PRECISION-1)
const double	EPS = 1e-5
	for MTD E.M. Algorithm
const short	DEBUG = 0
	debug level, for the compilation

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Detailed Description

Configuration file.

Author:

Vincent Miele

12/2003

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Contributors : M.Baudry, P.Y.Bourguignon, M.Hoebeke, V.Miele, P.Nicolas, G.Nuel, H.Richard, D.Robelin

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