Bio.SwissProt.SProt._SequenceConsumer

Package Bio :: Package SwissProt :: Module SProt :: Class _SequenceConsumer

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Class _SequenceConsumer

AbstractConsumer --+
                   |
                  _SequenceConsumer

Consumer that converts a SwissProt record to a SeqRecord object.

Members: data Record with SwissProt data. alphabet The alphabet the generated Seq objects will have.

Method Summary
	`__init__(self, alphabet)` Initialize a Sequence Consumer
	`accession(self, line)`
	`description(self, line)`
	`end_record(self)`
	`identification(self, line)`
	`sequence_data(self, line)`
	`start_record(self)`
Inherited from AbstractConsumer
	`__getattr__(self, attr)`
	`_unhandled(self, data)`
	`_unhandled_section(self)`

Method Details

Initialize a Sequence Consumer

Arguments: o alphabet - The alphabet to use for the generated Seq objects. If not supplied this will default to the generic protein alphabet.

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