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Package Bio :: Package FSSP :: Module FSSPTools
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Module Bio.FSSP.FSSPTools

Classes
FSSPAlign  
FSSPMultAlign  

Function Summary
  filter(sum_dict, align_dict, filter_attribute, low_bound, high_bound)
filters a passed summary section and alignment section according to a numeric attribute in the summary section.
  mult_align(sum_dict, align_dict)
Returns a biopython multiple alignment instance (Bio.Align.Generic)
  name_filter(sum_dict, align_dict, name_list)
Accepts a list of names.

Function Details

filter(sum_dict, align_dict, filter_attribute, low_bound, high_bound)

filters a passed summary section and alignment section according to a numeric attribute in the summary section. Returns new summary and alignment sections

mult_align(sum_dict, align_dict)

Returns a biopython multiple alignment instance (Bio.Align.Generic)

name_filter(sum_dict, align_dict, name_list)

Accepts a list of names. Returns a new Summary block and Alignment block which contain the info only for those names passed.

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