| Method Summary |
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__init__(self,
friendly_seq,
alphabet,
tuner_dict,
hot_mode)
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build_align(self,
seq)
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compute_accum_weight(self)
|
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create_lymphocyte(self)
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found_antigen(self,
detector,
mystery_sequence)
|
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guess_gaps(self,
seq)
Fill gaps with random selction from alphabet |
| |
lazy_auto_immune_check(self,
seq)
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lymphocyte_factory(self)
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pick_a_lymphocyte(self)
Random selection biased by weight |
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random_test(self,
mystery_sequence)
A single test probably won't catch a corrupted sequence. |
| |
scramble(self,
seq)
Substitute residues in sequence at random. |
| |
search_accum_weight(self,
t)
|
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select_at_random(self,
items)
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set_defaults(self)
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tune(self)
|