Bio.Medline.nlmmedline_001211

Package Bio :: Package Medline :: Module nlmmedline_001211_format

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Module Bio.Medline.nlmmedline_001211_format

A Martel format to parse the NLM's XML format for Medline.

http://www.nlm.nih.gov/databases/dtd/nlmmedline_001211.dtd http://www.nlm.nih.gov/databases/dtd/nlmmedlinecitation_001211.dtd http://www.nlm.nih.gov/databases/dtd/nlmcommon_001211.dtd

Formats: citation_format Format for one MedlineCitation. format Format for a whole file.

Function Summary
	`group_elem(element, expr, *attrs)`
	`simple_elem(element, attrs)` simple_elem(element, attrs)

Variable Summary
`Alt`	`author_name` = `<Martel.Expression.Alt instance at 0x2aaaa...`
`Group`	`citation_format` = `<Martel.Expression.Group instance at 0...`
`Seq`	`DeleteCitation_end` = `<Martel.Expression.Seq instance at ...`
`Seq`	`DeleteCitation_start` = `<Martel.Expression.Seq instance a...`
`Seq`	`DOCTYPE` = `<Martel.Expression.Seq instance at 0x2aaaad51b...`
`list`	`elements` = `['Year', 'Month', 'Day', 'Season', 'MedlineDa...`
`Seq`	`footer_format` = `<Martel.Expression.Seq instance at 0x2aa...`
`HeaderFooter`	`format` = `<Martel.Expression.HeaderFooter instance at 0x2...`
`Group`	`header_format` = `<Martel.Expression.Group instance at 0x2...`
`Seq`	`MedlineCitationSet_end` = `<Martel.Expression.Seq instance...`
`Seq`	`normal_date` = `<Martel.Expression.Seq instance at 0x2aaaa...`
`Seq`	`personal_name` = `<Martel.Expression.Seq instance at 0x2aa...`
`Alt`	`pub_date` = `<Martel.Expression.Alt instance at 0x2aaaad4f...`
`Seq`	`Ref_template` = `<Martel.Expression.Seq instance at 0x2aaa...`
`Any`	`space` = `<Martel.Expression.Any instance at 0x2aaaad5148c...`

Function Details

simple_elem(element, *attrs)

Create a Martel Expression in this module's namespace that will recognize an XML element in the form of: <element>data</element>

The whole element must be on a single line. The Expression will be created in the module's namespace with the same name as the element.

Variable Details

author_name

Type:: Alt
Value:: <Martel.Expression.Alt instance at 0x2aaaad52fd40>

citation_format

Type:: Group
Value:: <Martel.Expression.Group instance at 0x2aaaad514ea8>

DeleteCitation_end

Type:: Seq
Value:: <Martel.Expression.Seq instance at 0x2aaaad51b200>

DeleteCitation_start

Type:: Seq
Value:: <Martel.Expression.Seq instance at 0x2aaaad51b0e0>

DOCTYPE

Type:: Seq
Value:: <Martel.Expression.Seq instance at 0x2aaaad51b8c0>

elements

Type:: list
Value:: ['Year', 'Month', 'Day', 'Season', 'MedlineDate', 'Hour', 'Minute', 'S\ econd']

footer_format

Type:: Seq
Value:: <Martel.Expression.Seq instance at 0x2aaaad51b9e0>

format

Type:: HeaderFooter
Value:: <Martel.Expression.HeaderFooter instance at 0x2aaaad51ba28>

header_format

Type:: Group
Value:: <Martel.Expression.Group instance at 0x2aaaad51b908>

MedlineCitationSet_end

Type:: Seq
Value:: <Martel.Expression.Seq instance at 0x2aaaad51b2d8>

normal_date

Type:: Seq
Value:: <Martel.Expression.Seq instance at 0x2aaaad4fc200>

personal_name

Type:: Seq
Value:: <Martel.Expression.Seq instance at 0x2aaaad52fd88>

pub_date

Type:: Alt
Value:: <Martel.Expression.Alt instance at 0x2aaaad4fc368>

Ref_template

Type:: Seq
Value:: <Martel.Expression.Seq instance at 0x2aaaad50e3f8>

space

Type:: Any
Value:: <Martel.Expression.Any instance at 0x2aaaad5148c0>

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