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Package Bio :: Package Sequencing
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Package Bio.Sequencing

Code to deal with various programs for sequencing and assembly.

This code deals with programs such as Phred, Phrap and Consed -- which provide utilities for calling bases from sequencing reads, and assembling sequences into contigs.
Submodules
  • Ace: Parser for (new) ACE files output by PHRAP.
  • Phd: Parser for PHD files output by PHRED and used by PHRAP and CONSED.

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