Package Bio :: Package Emboss :: Module primer3_format
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Module Bio.Emboss.primer3_format

Martel definitions for the output files produced by primer3.
Variable Summary
MaxRepeat any_float = <Martel.Expression.MaxRepeat instance at 0x2...
MaxRepeat any_integer = <Martel.Expression.MaxRepeat instance at 0...
MaxRepeat any_space = <Martel.Expression.MaxRepeat instance at 0x2...
AnyEol blank_line = <Martel.Expression.AnyEol instance at 0x2aa...
Seq comment_line = <Martel.Expression.Seq instance at 0x2aaa...
Group comments = <Martel.Expression.Group instance at 0x2aaaad...
Group forward_line = <Martel.Expression.Group instance at 0x2a...
Group forward_primer_gc = <Martel.Expression.Group instance at...
Group forward_primer_length = <Martel.Expression.Group instanc...
Group forward_primer_seq = <Martel.Expression.Group instance a...
Group forward_primer_start = <Martel.Expression.Group instance...
Group forward_primer_tm = <Martel.Expression.Group instance at...
Group internal_line = <Martel.Expression.Group instance at 0x2...
Group internal_oligo_gc = <Martel.Expression.Group instance at...
Group internal_oligo_length = <Martel.Expression.Group instanc...
Group internal_oligo_seq = <Martel.Expression.Group instance a...
Group internal_oligo_start = <Martel.Expression.Group instance...
Group internal_oligo_tm = <Martel.Expression.Group instance at...
Str primer_space = <Martel.Expression.Str instance at 0x2aaa...
Group primer_start_line = <Martel.Expression.Group instance at...
Group product_size = <Martel.Expression.Group instance at 0x2a...
Group record = <Martel.Expression.Group instance at 0x2aaaad2d...
Group reverse_line = <Martel.Expression.Group instance at 0x2a...
Group reverse_primer_gc = <Martel.Expression.Group instance at...
Group reverse_primer_length = <Martel.Expression.Group instanc...
Group reverse_primer_seq = <Martel.Expression.Group instance a...
Group reverse_primer_start = <Martel.Expression.Group instance...
Group reverse_primer_tm = <Martel.Expression.Group instance at...
MaxRepeat sequence = <Martel.Expression.MaxRepeat instance at 0x2a...
Group single_primer_line = <Martel.Expression.Group instance a...
Group start_primer = <Martel.Expression.Group instance at 0x2a...

Variable Details

any_float

Type:
MaxRepeat
Value:
<Martel.Expression.MaxRepeat instance at 0x2aaaad2d15a8>               

any_integer

Type:
MaxRepeat
Value:
<Martel.Expression.MaxRepeat instance at 0x2aaaad2d1518>               

any_space

Type:
MaxRepeat
Value:
<Martel.Expression.MaxRepeat instance at 0x2aaaad303cb0>               

blank_line

Type:
AnyEol
Value:
<Martel.Expression.AnyEol instance at 0x2aaaad303c20>                  

comment_line

Type:
Seq
Value:
<Martel.Expression.Seq instance at 0x2aaaad303d40>                     

comments

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad303b90>                   

forward_line

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d18c0>                   

forward_primer_gc

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d1758>                   

forward_primer_length

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d13f8>                   

forward_primer_seq

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d17e8>                   

forward_primer_start

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d1488>                   

forward_primer_tm

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d16c8>                   

internal_line

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d2170>                   

internal_oligo_gc

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d1fc8>                   

internal_oligo_length

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d1ea8>                   

internal_oligo_seq

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d2098>                   

internal_oligo_start

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d1e18>                   

internal_oligo_tm

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d1f38>                   

primer_space

Type:
Str
Value:
<Martel.Expression.Str instance at 0x2aaaad2d13b0>                     

primer_start_line

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d1200>                   

product_size

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad303f80>                   

record

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d2758>                   

reverse_line

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d1cf8>                   

reverse_primer_gc

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d1b90>                   

reverse_primer_length

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d1a70>                   

reverse_primer_seq

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d1c20>                   

reverse_primer_start

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d19e0>                   

reverse_primer_tm

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d1b00>                   

sequence

Type:
MaxRepeat
Value:
<Martel.Expression.MaxRepeat instance at 0x2aaaad2d1638>               

single_primer_line

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad2d1320>                   

start_primer

Type:
Group
Value:
<Martel.Expression.Group instance at 0x2aaaad303ef0>                   

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