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Package Bio :: Package HMM :: Module Trainer :: Class TrainingSequence
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Class TrainingSequence

Hold a training sequence with emissions and optionally, a state path.
Method Summary
  __init__(self, emissions, state_path)
Initialize a training sequence.

Method Details

__init__(self, emissions, state_path)
(Constructor)

Initialize a training sequence.

Arguments:

o emissions - A Seq object containing the sequence of emissions in the training sequence, and the alphabet of the sequence.

o state_path - A Seq object containing the sequence of states and the alphabet of the states. If there is no known state path, then the sequence of states should be an empty string.

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