Bio.FSSP

Package Bio :: Package FSSP

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Package Bio.FSSP

Submodules
`fssp_rec` `FSSPTools`

Classes
`FSSPAlignDict`
`FSSPAlignRec`
`FSSPHeader`
`FSSPSumDict`
`FSSPSumRec`	Contains info from an FSSP summary record
`PosAlign`

Function Summary
	`read_fssp(fssp_handle)`

Variable Summary
`SRE_Pattern`	`alignments_rec` = `*[0-9]+ +-?[0-9]+`
`SRE_Pattern`	`alignments_title` = `## +ALIGNMENTS`
`SRE_Pattern`	`equiv_title` = `## +EQUIVALENCES`
`dict`	`header_records` = `{'source': <_sre.SRE_Pattern object at ...`
`SRE_Pattern`	`summary_rec` = `*[0-9]+: +[1-9][0-9a-z]{3}`
`SRE_Pattern`	`summary_title` = `## +SUMMARY`

Variable Details

alignments_rec

Type:: SRE_Pattern
Value:: *[0-9]+ +-?[0-9]+

alignments_title

Type:: SRE_Pattern
Value:: ## +ALIGNMENTS

equiv_title

Type:: SRE_Pattern
Value:: ## +EQUIVALENCES

header_records

Type:: dict
Value:: {'author': <_sre.SRE_Pattern object at 0xb789f5f8>, 'compnd': <_sre.SRE_Pattern object at 0xb789f548>, 'database': <_sre.SRE_Pattern object at 0xb7801b60>, 'header': <_sre.SRE_Pattern object at 0xb789f2e0>, 'nalign': <_sre.SRE_Pattern object at 0xb789f6a8>, 'pdbid': <_sre.SRE_Pattern object at 0xb778b7f0>, 'seqlength': <_sre.SRE_Pattern object at 0xb7801860>, 'source': <_sre.SRE_Pattern object at 0xb789f650>}

summary_rec

Type:: SRE_Pattern
Value:: *[0-9]+: +[1-9][0-9a-z]{3}

summary_title

Type:: SRE_Pattern
Value:: ## +SUMMARY

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